Well, strictly speaking, neither asks what the difference(s) are. They are both yes/no questions. Putting that aside, I think that yours is an overly intricate interpretation.
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Square Is there any difference in pronunciation between them?Use this. The listener will understand that "the difference" may consist of several features that are different. In English we are not expected to know how many differences there are between two things before we ask a question about the difference.
CalifJimThe listener will understand that "the difference" may consist of several features that are different. In English we are not expected to know how many differences there are between two things before we ask a question about the difference.In the case of large and complicated things, where many differences are to be expected, I think the distinction may